C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CCAAT/enhancer binding protein (C/EBP), gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130491 Cebpg-001 ENSMUSG00000056216 10090 - 7:35046422-35056503 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000130491
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000130491 5.478±1.21 4.962±0.39 5.283±2.82 3.151±1.43 5.908±1.54 8.644±1.30 2.517±0.60 5.345±0.66 7.418±3.39 11.553±2.12 5.642±2.69 4.925±1.72 5.867±2.21 7.808±2.94

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001889 ISS liver development
GO:0003677 IDA DNA binding
GO:0003690 IEA double-stranded DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006337 TAS nucleosome disassembly
GO:0006338 TAS chromatin remodeling
GO:0006351 IEA transcription, DNA-templated
GO:0006357 ISO regulation of transcription from RNA polymerase II promoter
GO:0006955 IDA immune response
GO:0008134 ISS transcription factor binding
GO:0016071 IMP mRNA metabolic process
GO:0030183 IEP B cell differentiation
GO:0042267 IMP natural killer cell mediated cytotoxicity
GO:0042803 NAS protein homodimerization activity
GO:0043353 IMP enucleate erythrocyte differentiation
GO:0043433 IDA negative regulation of sequence-specific DNA binding transcription factor activity
GO:0043565 ISS sequence-specific DNA binding
GO:0045078 IMP positive regulation of interferon-gamma biosynthetic process
GO:0045739 ISS positive regulation of DNA repair
GO:0046982 ISS protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000284000 CEBPG-001 protein_coding Homo_sapiens 0 717
ENST00000585933 CEBPG-002 protein_coding Homo_sapiens 0 588

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