C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: CCAAT/enhancer binding protein (C/EBP), gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000284000 CEBPG-001 ENSG00000153879 9606 + 19:33373330-33382686 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000284000
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000284000 11.470±0.00 7.850±0.00 1.675±0.00 4.468±1.35 5.214±3.81 8.338±1.84 2.711±1.52 4.318±1.85 5.591±1.41 3.358±2.63 17.186±12.79 7.499±4.59 6.026±1.16 9.741±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UH CIL_0003UH_0002 CGP 19:33299934-33382686

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001889 ISS liver development
GO:0003677 IDA DNA binding
GO:0003690 IEA double-stranded DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0006955 ISS immune response
GO:0008134 IDA transcription factor binding
GO:0016071 IEA mRNA metabolic process
GO:0030183 ISS B cell differentiation
GO:0042267 ISS natural killer cell mediated cytotoxicity
GO:0043353 ISS enucleate erythrocyte differentiation
GO:0043388 TAS positive regulation of DNA binding
GO:0043433 ISS negative regulation of sequence-specific DNA binding transcription factor activity
GO:0043565 IDA:IEA sequence-specific DNA binding
GO:0045078 ISS positive regulation of interferon-gamma biosynthetic process
GO:0045739 IEP positive regulation of DNA repair
GO:0046982 IDA protein heterodimerization activity
GO:0051091 TAS positive regulation of sequence-specific DNA binding transcription factor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000130491 Cebpg-001 protein_coding Mus_musculus 0 717
ENSMUST00000070191 Cebpg-002 protein_coding Mus_musculus 0 580

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