C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: M-phase phosphoprotein 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130502 Mphosph9-004 ENSMUSG00000038126 10090 - 5:124290981-124327870 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLiverOvaryPlacentaTestisENSMUST00000130502
Transcript ID Adipose Adrenal Breast Colon Heart Liver Ovary Placenta Testis
ENSMUST00000130502 0.912±0.00 0.423±0.00 1.183±0.17 0.534±0.07 0.821±0.00 0.292±0.11 1.357±0.52 0.459±0.00 6.720±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0002 VISTA 5:123871507-124476501
CIL_0003J5 CIL_0003J5_0002 CGP 5:124118690-124327972
CIL_0003J4 CIL_0003J4_0002 CGP 5:124250959-124341844

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302373 MPHOSPH9-005 nonsense_mediated_decay Homo_sapiens 0 917
ENST00000539024 MPHOSPH9-003 nonsense_mediated_decay Homo_sapiens 0 811
ENST00000541076 MPHOSPH9-025 protein_coding Homo_sapiens 0 682
ENST00000545556 MPHOSPH9-006 nonsense_mediated_decay Homo_sapiens 0 318
ENST00000606320 MPHOSPH9-030 protein_coding Homo_sapiens 0 682
ENST00000606326 MPHOSPH9-026 nonsense_mediated_decay Homo_sapiens 0 318

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