C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: M-phase phosphoprotein 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000302373 MPHOSPH9-005 ENSG00000051825 9606 - 12:123156636-123221847 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000302373
Transcript ID Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000302373 0.916±0.00 1.544±0.17 1.104±0.00 1.186±0.21 0.810±0.00 2.082±0.00 2.710±0.46 0.966±0.45 5.756±2.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0001 VISTA 12:122762377-123367178
CIL_0003J5 CIL_0003J5_0001 CGP 12:122983480-123244014
CIL_0003J4 CIL_0003J4_0001 CGP 12:123152320-123257959

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0005813 IDA centrosome
GO:0005886 IDA plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000184951 Mphosph9-011 protein_coding Mus_musculus 0 1611
ENSMUST00000147737 Mphosph9-002 nonsense_mediated_decay Mus_musculus 0 1611
ENSMUST00000031344 Mphosph9-001 protein_coding Mus_musculus 0 1611
ENSMUST00000130502 Mphosph9-004 nonsense_mediated_decay Mus_musculus 0 917
ENSMUST00000143476 Mphosph9-007 processed_transcript Mus_musculus 0 627
ENSMUST00000141203 Mphosph9-006 nonsense_mediated_decay Mus_musculus 0 601
ENSMUST00000128027 Mphosph9-009 processed_transcript Mus_musculus 0 250
ENSMUST00000156745 Mphosph9-010 processed_transcript Mus_musculus 0 231
ENSMUST00000142498 Mphosph9-008 retained_intron Mus_musculus 0 217

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