C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 788
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131180 Zfp788-006 ENSMUSG00000074165 10090 + 7:41633556-41648358 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonLiverOvaryPlacentaTestisENSMUST00000131180
Transcript ID Adrenal Brain Breast Colon Liver Ovary Placenta Testis
ENSMUST00000131180 0.281±0.14 6.369±0.00 0.312±0.12 0.251±0.00 0.122±0.00 0.964±1.09 1.020±0.29 1.860±1.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WQ CIL_0004WQ_0006 CGP 7:41599261-41651534

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254321 ZNF700-001 protein_coding Homo_sapiens 3e-22 111
ENST00000293725 ZNF563-001 protein_coding Homo_sapiens 8e-23 113
ENST00000318110 ZNF101-001 nonsense_mediated_decay Homo_sapiens 4e-29 134
ENST00000323169 ZNF491-001 protein_coding Homo_sapiens 4e-20 104
ENST00000340684 ZNF124-004 protein_coding Homo_sapiens 4e-34 150
ENST00000354656 ZNF44-004 nonsense_mediated_decay Homo_sapiens 4e-24 115
ENST00000355684 ZNF44-003 protein_coding Homo_sapiens 5e-24 117
ENST00000356109 ZNF44-002 protein_coding Homo_sapiens 2e-24 119
ENST00000361113 ZNF627-001 protein_coding Homo_sapiens 4e-36 158
ENST00000393337 ZNF44-006 nonsense_mediated_decay Homo_sapiens 2e-24 119
ENST00000397732 ZNF709-001 protein_coding Homo_sapiens 4e-23 115
ENST00000397742 ZNF44-001 nonsense_mediated_decay Homo_sapiens 5e-24 117
ENST00000415440 ZNF101-008 retained_intron Homo_sapiens 5e-25 121
ENST00000415784 ZNF101-005 protein_coding Homo_sapiens 1e-29 135
ENST00000424938 CTC-499B15.4-001 transcribed_unprocessed_pseudogene Homo_sapiens 3e-24 117
ENST00000428311 ZNF709-001 protein_coding Homo_sapiens 4e-23 115
ENST00000430298 ZNF788-001 protein_coding Homo_sapiens 2e-16 94
ENST00000435033 CTD-3105H18.14-001 nonsense_mediated_decay Homo_sapiens 2e-29 135
ENST00000444249 ZNF101-002 protein_coding Homo_sapiens 7e-25 119
ENST00000455490 ZNF709-003 protein_coding Homo_sapiens 3e-24 115
ENST00000472531 ZNF124-001 protein_coding Homo_sapiens 5e-34 150
ENST00000482090 ZNF700-002 protein_coding Homo_sapiens 3e-22 111
ENST00000491356 ZNF124-003 protein_coding Homo_sapiens 2e-34 150
ENST00000491848 ZNF124-007 processed_transcript Homo_sapiens 2e-34 150
ENST00000492230 ZNF491-004 processed_transcript Homo_sapiens 9e-21 104
ENST00000507003 CTD-3105H18.4-001 transcribed_unprocessed_pseudogene Homo_sapiens 1e-29 135
ENST00000543802 ZNF124-009 protein_coding Homo_sapiens 3e-34 150
ENST00000547473 CTD-2006C1.10-001 nonsense_mediated_decay Homo_sapiens 4e-29 132
ENST00000547628 ZNF878-001 protein_coding Homo_sapiens 2e-31 141
ENST00000585493 ZNF627-004 protein_coding Homo_sapiens 1e-34 150
ENST00000587939 ZNF627-003 protein_coding Homo_sapiens 2e-37 159
ENST00000588174 ZNF627-002 protein_coding Homo_sapiens 1e-35 156
ENST00000592502 ZNF101-004 protein_coding Homo_sapiens 1e-28 134
ENST00000594577 ZNF563-005 protein_coding Homo_sapiens 8e-23 111
ENST00000595977 ZNF563-004 protein_coding Homo_sapiens 3e-23 113
ENST00000596883 ZNF788-005 protein_coding Homo_sapiens 3e-17 94
ENST00000598753 CTD-3105H18.18-001 nonsense_mediated_decay Homo_sapiens 5e-24 115
ENST00000600003 ZNF44-007 nonsense_mediated_decay Homo_sapiens 1e-24 119
ENST00000601858 ZNF563-002 protein_coding Homo_sapiens 2e-23 113
ENST00000622593 ZNF700-201 protein_coding Homo_sapiens 3e-22 111

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