C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proliferation-associated 2G4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131728 Pa2g4-002 ENSMUSG00000025364 10090 - 10:128559438-128565827 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastOvaryPlacentaTestisENSMUST00000131728
Transcript ID Adipose Brain Breast Ovary Placenta Testis
ENSMUST00000131728 4.986±0.00 35.591±0.00 15.281±0.00 54.957±79.56 367.330±0.00 104.621±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 ISA DNA binding
GO:0003700 ISA sequence-specific DNA binding transcription factor activity
GO:0005634 ISA nucleus
GO:0008152 IEA metabolic process
GO:0016787 IEA hydrolase activity
GO:0030529 ISO ribonucleoprotein complex
GO:0045892 ISA negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303305 PA2G4-001 protein_coding Homo_sapiens 0 771
ENST00000414718 PA2G4P2-001 processed_pseudogene Homo_sapiens 0 641
ENST00000418595 RP1-159M24.1-001 processed_pseudogene Homo_sapiens 0 649
ENST00000438325 RP13-93L13.2-001 processed_pseudogene Homo_sapiens 0 643
ENST00000442248 PA2G4P1-001 processed_pseudogene Homo_sapiens 0 606
ENST00000473864 PA2G4P4-001 processed_pseudogene Homo_sapiens 0 713
ENST00000548861 RP11-603J24.9-001 protein_coding Homo_sapiens 0 481
ENST00000551061 PA2G4-009 protein_coding Homo_sapiens 0 230
ENST00000552266 PA2G4-005 retained_intron Homo_sapiens 3e-37 159
ENST00000552528 PA2G4-006 retained_intron Homo_sapiens 5e-26 121
ENST00000552766 PA2G4-010 protein_coding Homo_sapiens 0 771
ENST00000553057 PA2G4-008 protein_coding Homo_sapiens 0 551
ENST00000577406 PA2G4P3-001 processed_pseudogene Homo_sapiens 0 414

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