C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein arginine N-methyltransferase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000132227 Prmt5-003 ENSMUSG00000023110 10090 - 14:54511206-54517435 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WJ CIL_0006WJ_0002 CGP 14:54507187-54554361

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0003682 IMP chromatin binding
GO:0005634 IDA nucleus
GO:0005829 IBA cytosol
GO:0008168 ISO methyltransferase activity
GO:0008469 IBA histone-arginine N-methyltransferase activity
GO:0019918 IBA peptidyl-arginine methylation, to symmetrical-dimethyl arginine
GO:0034969 IBA histone arginine methylation
GO:0035246 ISO peptidyl-arginine N-methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216350 PRMT5-008 protein_coding Homo_sapiens 0 1064
ENST00000324366 PRMT5-003 protein_coding Homo_sapiens 0 1264
ENST00000397440 PRMT5-004 protein_coding Homo_sapiens 0 473
ENST00000397441 PRMT5-007 protein_coding Homo_sapiens 0 1264
ENST00000421938 PRMT5-026 protein_coding Homo_sapiens 0 444
ENST00000553502 PRMT5-017 protein_coding Homo_sapiens 0 475
ENST00000553550 PRMT5-014 protein_coding Homo_sapiens 0 339
ENST00000553641 PRMT5-024 processed_transcript Homo_sapiens 0 793
ENST00000553787 PRMT5-025 nonsense_mediated_decay Homo_sapiens 0 647
ENST00000553897 PRMT5-010 protein_coding Homo_sapiens 0 1064
ENST00000553915 PRMT5-009 nonsense_mediated_decay Homo_sapiens 0 1271
ENST00000554716 PRMT5-023 processed_transcript Homo_sapiens 0 300
ENST00000554867 PRMT5-028 protein_coding Homo_sapiens 0 191
ENST00000554910 PRMT5-015 protein_coding Homo_sapiens 0 592
ENST00000555530 PRMT5-020 protein_coding Homo_sapiens 0 1042
ENST00000556032 PRMT5-029 retained_intron Homo_sapiens 0 327
ENST00000556043 PRMT5-018 protein_coding Homo_sapiens 0 641
ENST00000556426 PRMT5-012 processed_transcript Homo_sapiens 0 191
ENST00000556616 PRMT5-027 protein_coding Homo_sapiens 0 795
ENST00000557015 PRMT5-011 retained_intron Homo_sapiens 0 215
ENST00000557415 PRMT5-013 nonsense_mediated_decay Homo_sapiens 0 841

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