C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C2 calcium-dependent domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133464 C2cd3-003 ENSMUSG00000047248 10090 + 7:100372246-100423354 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0001947 IMP heart looping
GO:0005515 IPI protein binding
GO:0005814 IDA centriole
GO:0007389 IMP pattern specification process
GO:0007420 IMP brain development
GO:0008589 IGI regulation of smoothened signaling pathway
GO:0016485 IMP protein processing
GO:0021915 IMP neural tube development
GO:0021997 IMP neural plate axis specification
GO:0030162 IDA regulation of proteolysis
GO:0030326 IMP embryonic limb morphogenesis
GO:0034451 IDA centriolar satellite
GO:0036064 IDA ciliary basal body
GO:0042384 IMP cilium assembly
GO:0042733 IMP embryonic digit morphogenesis
GO:0071539 IMP protein localization to centrosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313663 C2CD3-001 protein_coding Homo_sapiens 0 1934
ENST00000334126 C2CD3-201 protein_coding Homo_sapiens 0 1934
ENST00000415191 C2CD3-002 retained_intron Homo_sapiens 0 728
ENST00000535954 C2CD3-007 protein_coding Homo_sapiens 0 492
ENST00000537285 C2CD3-012 processed_transcript Homo_sapiens 0 761
ENST00000539061 C2CD3-003 protein_coding Homo_sapiens 0 754
ENST00000541922 C2CD3-009 processed_transcript Homo_sapiens 0 571
ENST00000542930 C2CD3-008 retained_intron Homo_sapiens 0 351
ENST00000544293 C2CD3-010 retained_intron Homo_sapiens 0 451

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