C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C2 calcium-dependent domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000334126 C2CD3-201 ENSG00000168014 9606 - 11:74012714-74171019 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000334126
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000334126 1.389±0.00 0.945±0.00 1.390±0.00 2.047±0.00 1.086±0.21 0.521±0.22 1.505±0.00 0.753±0.00 1.082±0.00 1.742±1.12 1.024±0.00 3.899±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IEA in utero embryonic development
GO:0001947 IEA heart looping
GO:0005515 IPI:IEA protein binding
GO:0005813 IDA centrosome
GO:0005814 IDA centriole
GO:0007389 IEA pattern specification process
GO:0007420 IEA brain development
GO:0008589 IEA regulation of smoothened signaling pathway
GO:0016485 IEA protein processing
GO:0021915 IEA neural tube development
GO:0021997 IEA neural plate axis specification
GO:0030162 IEA regulation of proteolysis
GO:0030326 IEA embryonic limb morphogenesis
GO:0034451 IDA centriolar satellite
GO:0035058 IMP nonmotile primary cilium assembly
GO:0036064 IEA ciliary basal body
GO:0042384 IEA cilium assembly
GO:0042733 IEA embryonic digit morphogenesis
GO:0061511 IDA centriole elongation
GO:0071539 IDA protein localization to centrosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000051777 C2cd3-001 protein_coding Mus_musculus 0 5325
ENSMUST00000098259 C2cd3-201 protein_coding Mus_musculus 0 4961
ENSMUST00000119647 C2cd3-006 protein_coding Mus_musculus 0 4591
ENSMUST00000120196 C2cd3-007 protein_coding Mus_musculus 0 2338
ENSMUST00000133464 C2cd3-003 nonsense_mediated_decay Mus_musculus 0 1934
ENSMUST00000185051 C2cd3-009 nonsense_mediated_decay Mus_musculus 0 723
ENSMUST00000156559 C2cd3-004 retained_intron Mus_musculus 0 625
ENSMUST00000184779 C2cd3-010 retained_intron Mus_musculus 0 254
ENSMUST00000185084 C2cd3-011 nonsense_mediated_decay Mus_musculus 0 228
ENSMUST00000184753 C2cd3-013 retained_intron Mus_musculus 9.99995e-41 174

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