C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134962 Abcc5-003 ENSMUSG00000022822 10090 - 16:20400760-20426324 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000134962
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000134962 11.055±1.23 7.440±0.81 12.231±1.68 9.052±2.77 7.633±0.49 1.739±0.45 3.953±0.87 3.419±0.82 1.579±1.18 11.046±1.98 2.509±0.55 9.004±2.13 5.612±3.14 0.931±0.15

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265586 ABCC5-201 protein_coding Homo_sapiens 0 641
ENST00000334444 ABCC5-001 protein_coding Homo_sapiens 0 641
ENST00000382494 ABCC5-005 protein_coding Homo_sapiens 0 640
ENST00000392579 ABCC5-004 protein_coding Homo_sapiens 0 640
ENST00000427120 ABCC5-006 protein_coding Homo_sapiens 0 765
ENST00000437205 ABCC5-007 nonsense_mediated_decay Homo_sapiens 0 641
ENST00000438979 ABCC5-009 nonsense_mediated_decay Homo_sapiens 0 555
ENST00000443376 ABCC5-003 nonsense_mediated_decay Homo_sapiens 0 640

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