C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tescalcin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135540 Tesc-006 ENSMUSG00000029359 10090 + 5:118027870-118061870 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastLiverMuscleOvaryTestisENSMUST00000135540
Transcript ID Adipose Brain Breast Liver Muscle Ovary Testis
ENSMUST00000135540 0.196±0.00 5.921±0.00 0.464±0.00 0.094±0.04 0.311±0.19 0.697±0.00 0.318±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004YQ CIL_0004YQ_0002 CGP 5:117976770-118061878
CIL_0004YT CIL_0004YT_0002 CGP 5:118027743-118155458

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335209 TESC-001 protein_coding Homo_sapiens 0 573
ENST00000462502 TESC-003 nonsense_mediated_decay Homo_sapiens 0 499
ENST00000470612 TESC-002 nonsense_mediated_decay Homo_sapiens 0 582
ENST00000482176 TESC-005 retained_intron Homo_sapiens 0 383
ENST00000535198 TESC-004 processed_transcript Homo_sapiens 0 267
ENST00000541210 TESC-201 protein_coding Homo_sapiens 0 320
ENST00000549210 TESC-007 protein_coding Homo_sapiens 9e-35 150

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