C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135678 Atp5a1-003 ENSMUSG00000025428 10090 + 18:77773992-77782655 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001P6 CIL_0001P6_0002 CGP 18:77757567-77782869

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IMP ATP binding
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0006629 IMP lipid metabolic process
GO:0046933 IMP proton-transporting ATP synthase activity, rotational mechanism
GO:1902600 IMP hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282050 ATP5A1-201 protein_coding Homo_sapiens 0 333
ENST00000398752 ATP5A1-001 protein_coding Homo_sapiens 0 333
ENST00000412323 ATP5A1P2-001 transcribed_processed_pseudogene Homo_sapiens 0 226
ENST00000423669 ATP5A1P8-001 processed_pseudogene Homo_sapiens 3e-34 150
ENST00000453978 ATP5A1P7-001 processed_pseudogene Homo_sapiens 3e-34 150
ENST00000454088 ATP5A1P6-001 processed_pseudogene Homo_sapiens 3e-34 150
ENST00000573189 ATP5A1P3-001 processed_pseudogene Homo_sapiens 0 237
ENST00000586523 ATP5A1-013 retained_intron Homo_sapiens 1.99993e-41 176
ENST00000586592 ATP5A1-008 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000587902 ATP5A1-007 retained_intron Homo_sapiens 1.99965e-42 176
ENST00000590156 ATP5A1-002 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000590665 ATP5A1-009 protein_coding Homo_sapiens 0 333
ENST00000593152 ATP5A1-202 protein_coding Homo_sapiens 0 333
ENST00000616464 ATP5A1P2-002 processed_transcript Homo_sapiens 0 302
ENST00000622403 ATP5A1P10-001 processed_pseudogene Homo_sapiens 2e-32 145

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