C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000616464 ATP5A1P2-002 ENSG00000227682 9606 + 2:155269692-155270134 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleTestisENST00000616464
Transcript ID Muscle Testis
ENST00000616464 0.022±0.00 0.412±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000758 CIL_000758_0001 CGP 2:154698299-156342348
CIL_0008OW CIL_0008OW_0001 VISTA 2:155243279-155844975
CIL_0008TU CIL_0008TU_0001 VISTA 2:155246510-155847603

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114748 Atp5a1-002 protein_coding Mus_musculus 0 303
ENSMUST00000026495 Atp5a1-001 protein_coding Mus_musculus 0 303
ENSMUST00000135678 Atp5a1-003 nonsense_mediated_decay Mus_musculus 0 302

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