C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: replication protein A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135770 Rpa1-005 ENSMUSG00000000751 10090 - 11:75301305-75342188 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastOvaryPlacentaTestisENSMUST00000135770
Transcript ID Brain Breast Ovary Placenta Testis
ENSMUST00000135770 19.679±0.00 4.125±0.00 32.198±0.00 37.698±28.63 51.263±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RP CIL_0007RP_0002 VISTA 11:74746156-75348336
CIL_00093G CIL_00093G_0002 VISTA 11:74749027-75350435
CIL_00037G CIL_00037G_0002 CGP 11:75193783-75348324

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254719 RPA1-001 protein_coding Homo_sapiens 0 1125
ENST00000573924 RPA1-004 processed_transcript Homo_sapiens 0 503
ENST00000573994 RPA1-005 retained_intron Homo_sapiens 0 309
ENST00000574049 RPA1-006 protein_coding Homo_sapiens 0 582

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