C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST3 beta-galactoside alpha-2,3-sialyltransferase 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137035 St3gal6-001 ENSMUSG00000022747 10090 - 16:58468125-58523426 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000137035
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000137035 6.047±0.88 3.238±0.38 9.253±0.99 5.311±1.05 6.514±1.23 7.014±2.57 4.504±0.40 5.310±0.71 2.688±1.93 10.189±0.54 3.851±0.00 7.516±0.98 3.770±0.86 2.372±0.55

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0006464 ISS cellular protein modification process
GO:0006486 IEA protein glycosylation
GO:0006664 ISS glycolipid metabolic process
GO:0008373 ISO sialyltransferase activity
GO:0009311 ISS oligosaccharide metabolic process
GO:0030173 IEA integral component of Golgi membrane
GO:0052798 ISS beta-galactoside alpha-2,3-sialyltransferase activity
GO:0070062 IEA extracellular vesicular exosome
GO:0071354 ISS cellular response to interleukin-6
GO:0097503 ISO:IEA sialylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265261 ST3GAL6-201 protein_coding Homo_sapiens 2e-19 102
ENST00000326840 DCBLD2-001 protein_coding Homo_sapiens 9.80909e-45 187
ENST00000394162 ST3GAL6-202 protein_coding Homo_sapiens 0 972
ENST00000462152 ST3GAL6-003 processed_transcript Homo_sapiens 0 771
ENST00000466482 ST3GAL6-009 processed_transcript Homo_sapiens 3e-20 102
ENST00000468553 ST3GAL6-013 protein_coding Homo_sapiens 0 215
ENST00000469105 ST3GAL6-002 nonsense_mediated_decay Homo_sapiens 0 859
ENST00000474595 ST3GAL6-022 processed_transcript Homo_sapiens 0.000000000007 75
ENST00000476833 ST3GAL6-014 nonsense_mediated_decay Homo_sapiens 5e-20 102
ENST00000477574 ST3GAL6-020 protein_coding Homo_sapiens 0 291
ENST00000477899 ST3GAL6-023 processed_transcript Homo_sapiens 0 575
ENST00000483910 ST3GAL6-001 protein_coding Homo_sapiens 0 972
ENST00000485145 ST3GAL6-021 protein_coding Homo_sapiens 0 470
ENST00000485391 ST3GAL6-016 protein_coding Homo_sapiens 0 215
ENST00000486249 ST3GAL6-004 nonsense_mediated_decay Homo_sapiens 2e-19 102
ENST00000486334 ST3GAL6-010 protein_coding Homo_sapiens 0 569
ENST00000492254 ST3GAL6-018 protein_coding Homo_sapiens 0 577
ENST00000493953 ST3GAL6-024 processed_transcript Homo_sapiens 0 575
ENST00000495376 ST3GAL6-017 nonsense_mediated_decay Homo_sapiens 4e-20 102
ENST00000497008 ST3GAL6-019 protein_coding Homo_sapiens 0 215
ENST00000497621 ST3GAL6-005 nonsense_mediated_decay Homo_sapiens 0 972
ENST00000613264 ST3GAL6-203 protein_coding Homo_sapiens 0 972

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