C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tec protein tyrosine kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138842 Tec-003 ENSMUSG00000029217 10090 - 5:72755738-72868483 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000138842
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000138842 0.282±0.00 0.252±0.00 0.195±0.00 0.790±0.31 1.077±0.44 0.837±0.21 0.788±0.24 1.888±0.40 0.566±0.12 0.599±0.00 0.772±0.37 1.439±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RD CIL_0008RD_0002 VISTA 5:72193972-72795406
CIL_0001MY CIL_0001MY_0002 CGP 5:72695978-72868483
CIL_0001MX CIL_0001MX_0002 CGP 5:72755718-72978829

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002376 IEA immune system process
GO:0004715 IEA non-membrane spanning protein tyrosine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005829 TAS cytosol
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0005911 IDA cell-cell junction
GO:0008289 IEA lipid binding
GO:0018108 IEA peptidyl-tyrosine phosphorylation
GO:0035556 IEA intracellular signal transduction
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258070 RP11-76H14.5-001 unprocessed_pseudogene Homo_sapiens 8.40779e-45 182
ENST00000381501 TEC-001 protein_coding Homo_sapiens 0 1395
ENST00000505452 TEC-005 nonsense_mediated_decay Homo_sapiens 0 2200
ENST00000511150 TEC-017 retained_intron Homo_sapiens 0 244
ENST00000511471 TEC-016 processed_transcript Homo_sapiens 0 878
ENST00000515146 TEC-015 nonsense_mediated_decay Homo_sapiens 0 540

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