C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12258
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139337 Gm12258-001 ENSMUSG00000072915 10090 + 11:58847158-58861956 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000139337
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000139337 2.278±0.48 0.881±0.07 3.437±0.54 7.135±3.18 1.808±0.29 1.338±0.24 0.565±0.06 0.936±0.39 1.174±0.75 2.369±0.43 0.410±0.08 1.983±0.39 0.905±0.16 0.710±0.25

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343459 ZNF34-006 protein_coding Homo_sapiens 0.000003 58
ENST00000377294 ZKSCAN4-001 protein_coding Homo_sapiens 0.0002 53
ENST00000429371 ZNF34-002 protein_coding Homo_sapiens 0.000003 58
ENST00000468296 ZNF717-006 protein_coding Homo_sapiens 4.00001e-40 169
ENST00000471541 ZNF717-003 protein_coding Homo_sapiens 3e-40 169
ENST00000477374 ZNF717-005 protein_coding Homo_sapiens 7e-40 169
ENST00000478296 ZNF717-002 protein_coding Homo_sapiens 2e-39 169
ENST00000491507 ZNF717-004 processed_transcript Homo_sapiens 1e-39 169
ENST00000527740 ZNF34-004 retained_intron Homo_sapiens 0.000003 58
ENST00000534337 ZNF34-007 protein_coding Homo_sapiens 0.000001 58
ENST00000534445 ZNF34-003 protein_coding Homo_sapiens 0.0000008 58

Loading