C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytohesin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139376 Cyth2-002 ENSMUSG00000003269 10090 - 7:45807639-45814302 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000139376
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000139376 6.383±2.59 10.867±1.13 8.880±2.09 31.394±4.92 5.129±1.50 10.442±3.04 4.619±1.15 9.118±2.96 3.970±1.47 7.621±1.20 4.438±1.29 12.397±5.29 16.974±11.36 38.044±3.48

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005086 IBA ARF guanyl-nucleotide exchange factor activity
GO:0005886 IBA plasma membrane
GO:0030155 IBA regulation of cell adhesion
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000050576 CYTH3 (1 of 3)-201 protein_coding Danio_rerio 0 647
ENSDART00000156553 CYTH3 (1 of 3)-001 protein_coding Danio_rerio 0 645
ENST00000325139 CYTH2-007 protein_coding Homo_sapiens 0 937
ENST00000391881 CYTH2-004 nonsense_mediated_decay Homo_sapiens 0 2013
ENST00000452733 CYTH2-001 protein_coding Homo_sapiens 0 1988
ENST00000460595 CYTH2-009 retained_intron Homo_sapiens 0 848
ENST00000462117 CYTH2-005 retained_intron Homo_sapiens 0 448
ENST00000467412 CYTH2-003 retained_intron Homo_sapiens 0 492
ENST00000474049 CYTH2-006 retained_intron Homo_sapiens 0 702
ENST00000493260 CYTH2-002 retained_intron Homo_sapiens 0 1325
ENST00000595676 CTC-273B12.7-001 protein_coding Homo_sapiens 0 470
ENST00000595765 CYTH2-010 protein_coding Homo_sapiens 0 732

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