C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytohesin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000452733 CYTH2-001 ENSG00000105443 9606 + 19:48469032-48479388 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLungMuscleOvaryPlacentaTestisENST00000452733
Transcript ID Breast Colon Lung Muscle Ovary Placenta Testis
ENST00000452733 1.505±0.00 1.354±0.00 2.421±0.00 1.248±0.00 14.832±8.89 14.626±0.78 24.015±7.35

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005086 IEA:ISS ARF guanyl-nucleotide exchange factor activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006897 TAS endocytosis
GO:0008289 IEA lipid binding
GO:0016020 TAS membrane
GO:0030036 TAS actin cytoskeleton organization
GO:0030155 IBA regulation of cell adhesion
GO:0032012 IEA regulation of ARF protein signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0070679 ISS inositol 1,4,5 trisphosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107729 Cyth2-001 protein_coding Mus_musculus 0 2061
ENSMUST00000056820 Cyth2-201 protein_coding Mus_musculus 0 2049
ENSMUST00000139376 Cyth2-002 nonsense_mediated_decay Mus_musculus 0 1988
ENSMUST00000107726 Cyth2-005 protein_coding Mus_musculus 0 1700
ENSMUST00000107728 Cyth2-003 protein_coding Mus_musculus 0 1319
ENSMUST00000129313 Cyth2-006 processed_transcript Mus_musculus 0 1147
ENSMUST00000110727 Cyth3-002 protein_coding Mus_musculus 0 837
ENSMUST00000116456 Cyth3-001 protein_coding Mus_musculus 0 837
ENSMUST00000124476 Cyth2-004 processed_transcript Mus_musculus 0 822
ENSDART00000140226 CYTH2-001 protein_coding Danio_rerio 0 741
ENSMUST00000136213 Cyth2-007 protein_coding Mus_musculus 0 732
ENSDART00000055408 cyth4a-201 protein_coding Danio_rerio 0 254
ENSDART00000141720 cyth4a-001 protein_coding Danio_rerio 0 254

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