C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myeloid differentiation primary response gene 88
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139870 Myd88-003 ENSMUSG00000032508 10090 - 9:119339690-119341411 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BE CIL_0008BE_0002 VISTA 9:119196374-119798584
CIL_000131 CIL_000131_0002 CGP 9:119238432-119341411

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002238 IMP response to molecule of fungal origin
GO:0002755 IGI MyD88-dependent toll-like receptor signaling pathway
GO:0005515 IPI protein binding
GO:0005737 TAS cytoplasm
GO:0006955 TAS immune response
GO:0007166 IMP cell surface receptor signaling pathway
GO:0007178 TAS transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0009615 IMP response to virus
GO:0016064 IMP immunoglobulin mediated immune response
GO:0031663 IMP lipopolysaccharide-mediated signaling pathway
GO:0032494 IMP response to peptidoglycan
GO:0032496 IMP response to lipopolysaccharide
GO:0032755 IMP positive regulation of interleukin-6 production
GO:0032760 IMP positive regulation of tumor necrosis factor production
GO:0042127 IGI regulation of cell proliferation
GO:0043123 IGI positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0044130 IMP negative regulation of growth of symbiont in host
GO:0045080 IGI positive regulation of chemokine biosynthetic process
GO:0045351 IMP type I interferon biosynthetic process
GO:0046330 IMP positive regulation of JNK cascade
GO:0050671 IMP positive regulation of lymphocyte proliferation
GO:0050830 IMP defense response to Gram-positive bacterium
GO:0051092 IGI positive regulation of NF-kappaB transcription factor activity
GO:0090557 IMP establishment of endothelial intestinal barrier

Homologs

No Homologs available.

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