C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppression of tumorigenicity 18, zinc finger
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000276480 ST18-001 ENSG00000147488 9606 - 8:52110839-52409743 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainHeartKidneyLiverOvaryPlacentaTestisENST00000276480
Transcript ID Adipose Adrenal Brain Heart Kidney Liver Ovary Placenta Testis
ENST00000276480 0.012±0.00 0.016±0.00 0.904±0.00 0.006±0.00 0.042±0.00 0.014±0.00 0.006±0.00 0.051±0.00 0.098±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097E CIL_00097E_0001 VISTA 8:51954170-52555276

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163727 St18-201 protein_coding Mus_musculus 0 5009
ENSMUST00000043578 St18-001 protein_coding Mus_musculus 0 5009
ENSMUST00000131494 St18-005 protein_coding Mus_musculus 0 5009
ENSMUST00000140079 St18-004 protein_coding Mus_musculus 0 5009
ENSMUST00000150761 St18-002 protein_coding Mus_musculus 0 3864
ENSMUST00000151281 St18-003 protein_coding Mus_musculus 0 3358
ENSMUST00000151015 St18-013 processed_transcript Mus_musculus 0 989
ENSMUST00000142304 St18-012 processed_transcript Mus_musculus 0 529
ENSMUST00000130338 St18-014 processed_transcript Mus_musculus 0 449

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