C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S16, pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140155 Rps16-ps2-001 ENSMUSG00000060419 10090 - 5:129128077-129128517 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000140155
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000140155 32.645±8.90 11.774±0.22 37.898±24.04 30.746±4.28 23.932±2.48 22.072±7.02 12.213±1.51 27.650±12.52 35.307±24.16 22.109±3.58 2.585±0.78 31.496±14.23 12.145±12.63 10.790±1.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00042Z CIL_00042Z_0002 CGP 5:129020069-129204599
CIL_00042Y CIL_00042Y_0002 CGP 5:129096750-129571383

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000434475 ZNF90-201 protein_coding Homo_sapiens 0 527
ENST00000469078 ZNF90-002 nonsense_mediated_decay Homo_sapiens 0 527
ENST00000474284 ZNF90-003 processed_transcript Homo_sapiens 0 527
ENST00000477220 RPS16P9-001 processed_pseudogene Homo_sapiens 0 292
ENST00000497576 CTC-260E6.2-001 transcribed_processed_pseudogene Homo_sapiens 0 527

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