C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoribosyl pyrophosphate synthetase-associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140917 Prpsap1-006 ENSMUSG00000015869 10090 - 11:116471299-116478320 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleOvaryPlacentaTestisENSMUST00000140917
Transcript ID Brain Muscle Ovary Placenta Testis
ENSMUST00000140917 11.015±0.00 1.867±0.00 34.551±0.00 10.436±3.53 7.544±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0002 VISTA 11:116019003-116619995
CIL_0001IJ CIL_0001IJ_0002 CGP 11:116441325-116494202
CIL_00009I CIL_00009I_0002 CGP 11:116470845-116536674

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324684 PRPSAP1-002 protein_coding Homo_sapiens 0 647
ENST00000435555 PRPSAP1-003 protein_coding Homo_sapiens 0 444
ENST00000436498 PRPSAP1-007 protein_coding Homo_sapiens 0 220
ENST00000446526 PRPSAP1-001 protein_coding Homo_sapiens 0 647
ENST00000586137 PRPSAP1-011 retained_intron Homo_sapiens 0 326

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