C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001IJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000129646-ENSG00000161542 CGP 9606 17:76274049-76384521
GeneTranscriptPositionBiotype
ENSG00000129646 (QRICH2)
glutamine rich 2 		ENST00000262765 (QRICH2-001) 76274049-76307680 protein_coding
ENST00000447564 (QRICH2-003) 76274051-76291252 protein_coding
ENST00000524722 (QRICH2-002) 76274131-76307565 nonsense_mediated_decay
ENST00000532549 (QRICH2-004) 76274184-76280357 protein_coding
ENSG00000161542 (PRPSAP1)
phosphoribosyl pyrophosphate synthetase-associated protein 1 		ENST00000324684 (PRPSAP1-002) 76310934-76354198 protein_coding
ENST00000423915 (PRPSAP1-004) 76330552-76384521 protein_coding
ENST00000435555 (PRPSAP1-003) 76312870-76354929 protein_coding
ENST00000436498 (PRPSAP1-007) 76328717-76353452 protein_coding
ENST00000442767 (PRPSAP1-005) 76332287-76384484 protein_coding
ENST00000446526 (PRPSAP1-001) 76309486-76354149 protein_coding
ENST00000472686 (PRPSAP1-008) 76313601-76328986 retained_intron
ENST00000488339 (PRPSAP1-009) 76312793-76328864 retained_intron
ENST00000494662 (PRPSAP1-006) 76330483-76353628 retained_intron
ENST00000586137 (PRPSAP1-011) 76313824-76330301 retained_intron
ENST00000588364 (PRPSAP1-012) 76311386-76313740 processed_transcript
ENST00000592474 (PRPSAP1-010) 76312793-76314690 retained_intron
ENSG00000176170 (SPHK1)
sphingosine kinase 1 		ENST00000323374 (SPHK1-001) 76384650-76387855 protein_coding
ENST00000392496 (SPHK1-004) 76385292-76387857 protein_coding
ENST00000545180 (SPHK1-006) 76376661-76387860 protein_coding
ENST00000587167 (SPHK1-011) 76386023-76386561 retained_intron
ENST00000588682 (SPHK1-009) 76381771-76386887 protein_coding
ENST00000590379 (SPHK1-010) 76383919-76386469 protein_coding
ENST00000590959 (SPHK1-003) 76384621-76387860 protein_coding
ENST00000591651 (SPHK1-008) 76376584-76385991 protein_coding
ENST00000591762 (SPHK1-005) 76382977-76387856 retained_intron
ENST00000592299 (SPHK1-002) 76384609-76387860 protein_coding
ENSG00000251779 (Y_RNA)
Y RNA 		ENST00000515970 (Y_RNA.1-860) 76319376-76319473 misc_RNA
ENSG00000267518 (RP11-794C22.2)
 ENST00000586264 (RP11-794C22.2-001) 76345761-76346081 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0001IJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000070331-ENSMUSG00000015869 CGP 10090 11:116441325-116494202
GeneTranscriptPositionBiotype
ENSMUSG00000015869 (Prpsap1)
phosphoribosyl pyrophosphate synthetase-associated protein 1 		ENSMUST00000106391 (Prpsap1-001) 116470845-116490348 protein_coding
ENSMUST00000130835 (Prpsap1-009) 116478292-116490289 processed_transcript
ENSMUST00000135196 (Prpsap1-003) 116478534-116490335 protein_coding
ENSMUST00000140917 (Prpsap1-006) 116471299-116478320 processed_transcript
ENSMUST00000142480 (Prpsap1-007) 116471400-116477739 processed_transcript
ENSMUST00000144154 (Prpsap1-005) 116485531-116490327 processed_transcript
ENSMUST00000147858 (Prpsap1-008) 116471376-116473243 processed_transcript
ENSMUST00000152496 (Prpsap1-004) 116478060-116494202 protein_coding
ENSMUST00000152874 (Prpsap1-002) 116470845-116490314 processed_transcript
ENSMUSG00000070331 (Qrich2)
glutamine rich 2 		ENSMUST00000093909 (Qrich2-002) 116441325-116454347 protein_coding
ENSMUST00000134182 (Qrich2-001) 116441329-116455237 protein_coding
ENSMUST00000140697 (Qrich2-003) 116444541-116446991 retained_intron
ENSMUSG00000086826 (Gm11739)
predicted gene 11739 		ENSMUST00000125269 (Gm11739-001) 116466319-116474274 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001IJ_0001ENSG00000129646ENST00000262765ENST00000447564ENST00000524722ENST00000532549ENSG00000161542ENST00000324684ENST00000423915ENST00000435555ENST00000436498ENST00000442767ENST00000446526ENST00000472686ENST00000488339ENST00000494662ENST00000586137ENST00000588364ENST00000592474ENSG00000176170ENST00000323374ENST00000392496ENST00000545180ENST00000587167ENST00000588682ENST00000590379ENST00000590959ENST00000591651ENST00000591762ENST00000592299ENSG00000251779ENST00000515970ENSG00000267518ENST00000586264CIL_0001IJ_0002ENSMUSG00000015869ENSMUST00000106391ENSMUST00000130835ENSMUST00000135196ENSMUST00000140917ENSMUST00000142480ENSMUST00000144154ENSMUST00000147858ENSMUST00000152496ENSMUST00000152874ENSMUSG00000070331ENSMUST00000093909ENSMUST00000134182ENSMUST00000140697ENSMUSG00000086826ENSMUST00000125269
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001IJ_0001ENSG00000129646ENST00000262765ENST00000447564ENST00000524722ENST00000532549ENSG00000161542ENST00000324684ENST00000435555ENST00000446526ENST00000472686ENST00000488339ENST00000494662ENST00000588364ENST00000592474ENSG00000176170ENST00000323374ENST00000392496ENST00000592299ENSG00000251779ENST00000515970ENSG00000267518ENST00000586264CIL_0001IJ_0002ENSMUSG00000015869ENSMUST00000106391ENSMUST00000130835ENSMUST00000135196ENSMUST00000140917ENSMUST00000142480ENSMUST00000144154ENSMUST00000147858ENSMUST00000152874ENSMUSG00000070331ENSMUST00000093909ENSMUST00000134182ENSMUST00000140697ENSMUSG00000086826ENSMUST00000125269
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000129646 ENST00000262765 N/A 0.112±0.00 N/A 0.224±0.00 N/A 0.104±0.00 0.130±0.00 0.878±0.00 0.116±0.00 0.146±0.00 N/A 0.412±0.09 0.211±0.00 7.325±4.58
ENST00000447564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.577±0.00
ENST00000524722 N/A 0.367±0.00 N/A 0.245±0.00 0.255±0.00 0.363±0.00 0.070±0.00 N/A N/A N/A N/A 0.625±0.12 0.462±0.05 6.128±2.14
ENST00000532549 0.355±0.00 N/A N/A 0.539±0.00 0.498±0.00 N/A N/A N/A 0.333±0.00 N/A N/A 0.933±0.00 0.377±0.00 N/A
ENSG00000161542 ENST00000324684 13.296±0.00 14.075±0.00 1.178±0.00 13.815±10.78 11.282±9.85 4.913±3.44 2.055±1.30 6.112±0.80 2.558±1.76 8.095±2.94 2.226±1.81 14.008±8.89 19.504±7.19 23.743±12.29
ENST00000423915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435555 N/A N/A N/A N/A 2.748±0.00 N/A 0.469±0.00 3.091±0.00 1.456±0.00 N/A N/A 3.565±0.00 N/A N/A
ENST00000436498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446526 1.779±0.00 N/A N/A N/A N/A 0.952±0.00 0.748±0.00 1.144±0.33 0.783±0.07 N/A 0.703±0.00 N/A N/A N/A
ENST00000472686 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.812±0.00 N/A N/A N/A N/A
ENST00000488339 N/A N/A N/A 12.176±0.00 N/A N/A N/A N/A N/A N/A 1.628±0.00 42.454±0.00 45.547±0.00 50.812±0.00
ENST00000494662 N/A N/A N/A N/A N/A 3.530±0.00 N/A N/A N/A N/A 0.702±0.00 N/A N/A 15.513±0.00
ENST00000586137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588364 N/A N/A N/A N/A 2.193±0.00 N/A N/A N/A N/A N/A N/A 9.438±0.00 N/A N/A
ENST00000592474 N/A N/A N/A N/A N/A 0.914±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000176170 ENST00000323374 N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.643±0.00 N/A N/A N/A N/A
ENST00000392496 N/A 18.946±0.00 N/A N/A N/A N/A N/A N/A N/A 16.926±0.00 N/A N/A N/A N/A
ENST00000545180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592299 N/A N/A N/A N/A N/A 4.707±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251779 ENST00000515970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.127±0.00 N/A N/A
ENSG00000267518 ENST00000586264 0.201±0.00 N/A N/A N/A N/A N/A 0.211±0.00 0.387±0.00 N/A N/A N/A N/A N/A 0.126±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015869 ENSMUST00000106391 43.047±9.50 50.630±2.66 43.891±7.67 25.204±14.09 24.068±5.38 65.907±5.48 12.468±2.04 38.521±3.39 24.438±8.62 33.865±2.77 3.385±0.81 71.848±27.77 16.720±8.49 15.789±9.77
ENSMUST00000130835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.905±0.11 N/A 4.591±0.00 N/A
ENSMUST00000135196 41.270±0.00 80.632±38.67 N/A N/A 50.477±7.35 65.507±8.25 N/A 25.205±0.00 11.667±0.67 29.227±5.68 N/A 100.318±38.15 N/A N/A
ENSMUST00000140917 N/A N/A N/A 11.015±0.00 N/A N/A N/A N/A N/A N/A 1.867±0.00 34.551±0.00 10.436±3.53 7.544±0.00
ENSMUST00000142480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.145±0.00
ENSMUST00000144154 N/A 160.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147858 N/A N/A N/A 8.946±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.496±0.00
ENSMUST00000152496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152874 N/A 40.083±2.57 N/A 5.761±0.00 4.171±0.00 N/A N/A N/A N/A N/A 0.993±0.00 23.677±0.00 8.670±1.87 5.922±0.14
ENSMUSG00000070331 ENSMUST00000093909 0.095±0.01 0.033±0.02 N/A 0.067±0.00 0.107±0.07 0.042±0.03 0.046±0.01 0.097±0.04 0.026±0.02 0.064±0.03 0.018±0.00 0.186±0.10 0.247±0.20 N/A
ENSMUST00000134182 N/A 0.019±0.01 N/A N/A 0.016±0.00 0.028±0.01 N/A 0.049±0.01 N/A N/A N/A 0.074±0.00 N/A 111.355±99.66
ENSMUST00000140697 0.105±0.00 0.121±0.01 N/A N/A 0.223±0.07 0.062±0.02 0.147±0.02 0.054±0.01 0.056±0.00 0.069±0.00 N/A 0.488±0.29 0.984±1.27 N/A
ENSMUSG00000086826 ENSMUST00000125269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.460±0.00

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