C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000142038  |
Smg6-005 |
ENSMUSG00000038290 |
10090 | + |
11:75132435-75139369  |
processed_transcript |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007RP | CIL_0007RP_0002 | VISTA | 11:74746156-75348336 |
| CIL_00093G | CIL_00093G_0002 | VISTA | 11:74749027-75350435 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000263073
|
SMG6-001 | protein_coding | Homo_sapiens | 0 | 315 |
|
ENST00000354901
|
SMG6-002 | protein_coding | Homo_sapiens | 0 | 315 |
|
ENST00000536871
|
SMG6-005 | protein_coding | Homo_sapiens | 0 | 315 |
|
ENST00000570874
|
SMG6-011 | retained_intron | Homo_sapiens | 0 | 219 |
|
ENST00000573166
|
SMG6-003 | processed_transcript | Homo_sapiens | 0 | 316 |
|
ENST00000575338
|
SMG6-007 | processed_transcript | Homo_sapiens | 0 | 508 |
|
ENST00000575454
|
SMG6-010 | protein_coding | Homo_sapiens | 0 | 315 |
