C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sh3 domain YSC-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142693 Sh3yl1-003 ENSMUSG00000020669 10090 + 12:30911668-30960018 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000142693
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000142693 0.395±0.32 0.250±0.12 1.716±0.41 1.699±0.01 0.627±0.37 3.085±0.84 0.076±0.01 1.576±0.36 2.627±2.15 0.821±0.19 0.044±0.02 0.830±0.35 0.446±0.31 0.967±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356150 SH3YL1-001 protein_coding Homo_sapiens 0 806
ENST00000402632 SH3YL1-004 protein_coding Homo_sapiens 0 403
ENST00000403657 SH3YL1-011 protein_coding Homo_sapiens 0 398
ENST00000403658 SH3YL1-005 protein_coding Homo_sapiens 0 398
ENST00000403712 SH3YL1-002 protein_coding Homo_sapiens 0 806
ENST00000405430 SH3YL1-003 protein_coding Homo_sapiens 0 802
ENST00000415368 SH3YL1-016 protein_coding Homo_sapiens 0 219
ENST00000431160 SH3YL1-019 protein_coding Homo_sapiens 0 510
ENST00000451005 SH3YL1-020 protein_coding Homo_sapiens 0 399
ENST00000454318 SH3YL1-023 protein_coding Homo_sapiens 0 398
ENST00000463865 SH3YL1-007 processed_transcript Homo_sapiens 0 797
ENST00000468321 SH3YL1-006 processed_transcript Homo_sapiens 0 797
ENST00000471948 SH3YL1-010 retained_intron Homo_sapiens 0 797
ENST00000473104 SH3YL1-008 processed_transcript Homo_sapiens 0 398
ENST00000475027 SH3YL1-024 processed_transcript Homo_sapiens 0 398
ENST00000479739 SH3YL1-009 nonsense_mediated_decay Homo_sapiens 0 398
ENST00000488044 SH3YL1-022 processed_transcript Homo_sapiens 0 691
ENST00000488979 SH3YL1-017 processed_transcript Homo_sapiens 0 617

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