C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: helicase-like transcription factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143005 Hltf-002 ENSMUSG00000002428 10090 + 3:20057811-20117281 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000143005
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000143005 0.991±0.19 1.231±0.26 1.372±0.32 1.341±0.07 0.563±0.00 0.548±0.11 0.497±0.02 1.147±0.27 1.635±0.52 1.066±0.00 0.336±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089F CIL_00089F_0002 VISTA 3:19844419-20446014

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005524 IEA ATP binding
GO:0006200 IDA ATP catabolic process
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0008270 IEA zinc ion binding
GO:0016887 IDA ATPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310053 HLTF-003 protein_coding Homo_sapiens 0 1666
ENST00000392912 HLTF-004 protein_coding Homo_sapiens 0 1666
ENST00000465259 HLTF-002 protein_coding Homo_sapiens 0 1674
ENST00000493881 HLTF-006 processed_transcript Homo_sapiens 1e-34 150
ENST00000494055 HLTF-001 protein_coding Homo_sapiens 0 1666

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