C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transmembrane protein 161A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143543 Tmem161a-005 ENSMUSG00000002342 10090 + 8:70180539-70182032 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverOvaryENSMUST00000143543
Transcript ID Brain Colon Liver Ovary
ENSMUST00000143543 10.346±1.40 20.296±4.72 5.107±0.19 14.655±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BD CIL_0006BD_0002 CGP 8:70152778-70183681

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000162044 TMEM161A-004 protein_coding Homo_sapiens 0 409
ENST00000450333 TMEM161A-002 protein_coding Homo_sapiens 0 409
ENST00000587406 TMEM161A-001 retained_intron Homo_sapiens 0 507
ENST00000587583 TMEM161A-006 protein_coding Homo_sapiens 0 409
ENST00000587925 TMEM161A-012 protein_coding Homo_sapiens 0 200
ENST00000587985 TMEM161A-019 nonsense_mediated_decay Homo_sapiens 0 383
ENST00000589448 TMEM161A-003 retained_intron Homo_sapiens 0 409

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