C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: deafness, autosomal recessive 59 (human)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144817 Dfnb59-003 ENSMUSG00000075267 10090 + 2:76648499-76655829 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeKidneyLiverOvaryPlacentaTestisENSMUST00000144817
Transcript ID Adipose Kidney Liver Ovary Placenta Testis
ENSMUST00000144817 0.062±0.00 0.229±0.07 0.023±0.01 0.046±0.00 0.030±0.00 0.126±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Z0 CIL_0000Z0_0002 CGP 2:76629898-76658556
CIL_0000YZ CIL_0000YZ_0002 CGP 2:76648476-76673116

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0007605 IMP sensory perception of sound
GO:0043025 IDA neuronal cell body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000375129 DFNB59-003 protein_coding Homo_sapiens 0 743
ENST00000409117 DFNB59-001 protein_coding Homo_sapiens 0 734
ENST00000437056 DFNB59-002 retained_intron Homo_sapiens 0 448
ENST00000442710 DFNB59-005 protein_coding Homo_sapiens 0 472
ENST00000444615 DFNB59-004 nonsense_mediated_decay Homo_sapiens 0 268
ENST00000605419 DFNB59-006 processed_transcript Homo_sapiens 0 213

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