C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0000Z0_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000180228-ENSG00000204311 | CGP | 9606 | 2:178431414-178461390  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000180228  (PRKRA)protein kinase, interferon-inducible double stranded RNA dependent activator |
ENST00000325748 (PRKRA-001)
|
178431414-178451231 | protein_coding | |
|
ENST00000424699 (PRKRA-002)
|
178431654-178451151 | nonsense_mediated_decay | ||
|
ENST00000432031 (PRKRA-009)
|
178431976-178450757 | protein_coding | ||
|
ENST00000448279 (PRKRA-011)
|
178443289-178450484 | nonsense_mediated_decay | ||
|
ENST00000457633 (PRKRA-008)
|
178443343-178451059 | protein_coding | ||
|
ENST00000460433 (PRKRA-010)
|
178445495-178450729 | processed_transcript | ||
|
ENST00000463882 (PRKRA-006)
|
178450079-178451173 | retained_intron | ||
|
ENST00000466165 (PRKRA-007)
|
178447320-178451113 | retained_intron | ||
|
ENST00000470200 (PRKRA-005)
|
178445426-178451512 | processed_transcript | ||
|
ENST00000474793 (PRKRA-012)
|
178436274-178445883 | retained_intron | ||
|
ENST00000487082 (PRKRA-003)
|
178431966-178450764 | protein_coding | ||
|
ENST00000490501 (PRKRA-004)
|
178431415-178444007 | retained_intron | ||
|
ENSG00000204311 (DFNB59) deafness, autosomal recessive 59 |
ENST00000375129 (DFNB59-003)
|
178453267-178461274 | protein_coding | |
|
ENST00000409117 (DFNB59-001)
|
178451436-178461390 | protein_coding | ||
|
ENST00000437056 (DFNB59-002)
|
178453251-178461287 | retained_intron | ||
|
ENST00000442710 (DFNB59-005)
|
178453568-178461204 | protein_coding | ||
|
ENST00000444615 (DFNB59-004)
|
178454479-178460432 | nonsense_mediated_decay | ||
|
ENST00000605419 (DFNB59-006)
|
178456009-178458627 | processed_transcript | ||
|
ENSG00000238082 (AC009948.7) |
ENST00000437039 (AC009948.7-001)
|
178454716-178455428 | processed_pseudogene | |
| CIL_0000Z0_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000002731-ENSMUSG00000075267 | CGP | 10090 | 2:76629898-76658556 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000002731 (Prkra) protein kinase, interferon inducible double stranded RNA dependent activator |
ENSMUST00000002808 (Prkra-001)
|
76629898-76648015 | protein_coding | |
|
ENSMUST00000140493 (Prkra-002)
|
76636795-76640733 | processed_transcript | ||
|
ENSMUSG00000075267 (Dfnb59) deafness, autosomal recessive 59 (human) |
ENSMUST00000099986 (Dfnb59-001)
|
76650273-76658556 | protein_coding | |
|
ENSMUST00000144817 (Dfnb59-003)
|
76648499-76655829 | protein_coding | ||
|
ENSMUST00000153471 (Dfnb59-002)
|
76648476-76651425 | protein_coding | ||
Expression Patterns
|
