C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 11A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144892 Pde11a-002 ENSMUSG00000075270 10090 - 2:76027665-76215394 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000144892
Transcript ID Adrenal Bladder Breast Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000144892 0.127±0.06 0.012±0.00 0.180±0.05 0.147±0.00 0.252±0.00 0.032±0.03 0.147±0.00 0.024±0.01 0.141±0.04 0.362±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Z3 CIL_0000Z3_0002 CGP 2:75978247-76338774

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000073625 pde5ab-201 protein_coding Danio_rerio 0.00003 55
ENSDART00000138188 pde5ab-001 protein_coding Danio_rerio 0.00003 55
ENST00000286063 PDE11A-001 protein_coding Homo_sapiens 0 1018
ENST00000358450 PDE11A-002 protein_coding Homo_sapiens 0 1018
ENST00000389683 PDE11A-003 protein_coding Homo_sapiens 0 1018
ENST00000409504 PDE11A-004 protein_coding Homo_sapiens 0 1018
ENST00000427127 PDE11A-008 nonsense_mediated_decay Homo_sapiens 3e-26 122
ENST00000433879 PDE11A-006 protein_coding Homo_sapiens 0 1749
ENST00000436700 PDE11A-007 protein_coding Homo_sapiens 8e-25 119
ENST00000466790 PDE11A-009 processed_transcript Homo_sapiens 7e-26 121
ENST00000478646 PDE11A-011 retained_intron Homo_sapiens 3e-26 122
ENST00000488399 PDE11A-010 processed_transcript Homo_sapiens 9e-26 121
ENST00000497003 PDE11A-005 processed_transcript Homo_sapiens 0 839

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