C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neurofibromatosis 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145839 Nf1-005 ENSMUSG00000020716 10090 + 11:79339693-79345186 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalENSMUST00000145839
Transcript ID Adrenal
ENSMUST00000145839 2.823±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SM CIL_0007SM_0002 VISTA 11:78750979-79355443
CIL_0004GN CIL_0004GN_0003 CGP 11:79339693-79581612

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356175 NF1-002 protein_coding Homo_sapiens 0 335
ENST00000358273 NF1-001 protein_coding Homo_sapiens 0 335
ENST00000431387 NF1-010 protein_coding Homo_sapiens 0 335
ENST00000487476 NF1-004 retained_intron Homo_sapiens 0 335
ENST00000579081 NF1-009 nonsense_mediated_decay Homo_sapiens 1e-30 141

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