C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147058 St8sia1-002 ENSMUSG00000030283 10090 - 6:142828861-142883040 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; MusclePlacentaTestisENSMUST00000147058
Transcript ID Muscle Placenta Testis
ENSMUST00000147058 0.073±0.03 0.070±0.03 1.256±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090B CIL_00090B_0002 VISTA 6:142366341-142969080
CIL_0005PQ CIL_0005PQ_0002 CGP 6:142821545-143100107

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261197 ST8SIA1-007 nonsense_mediated_decay Homo_sapiens 0 547
ENST00000396037 ST8SIA1-001 protein_coding Homo_sapiens 0 726
ENST00000508924 ST8SIA1-009 processed_transcript Homo_sapiens 0 518
ENST00000540824 ST8SIA1-006 protein_coding Homo_sapiens 0 429
ENST00000541868 ST8SIA1-011 protein_coding Homo_sapiens 0 272
ENST00000545494 ST8SIA1-008 processed_transcript Homo_sapiens 0 725
ENST00000545524 ST8SIA1-013 processed_transcript Homo_sapiens 0 274

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