C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147545 Ccdc6-001 ENSMUSG00000048701 10090 + 10:70097121-70193200 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000147545
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000147545 11.772±3.36 12.291±0.75 18.395±0.32 9.856±3.54 13.022±0.69 19.183±0.87 5.156±1.46 8.280±6.15 5.753±2.06 7.641±3.36 11.171±2.89 20.007±4.79 12.669±5.10 6.824±3.38

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0008150 ND biological_process
GO:0017124 IEA SH3 domain binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000126712 ccdc6b-202 protein_coding Danio_rerio 0 861
ENSDART00000126219 ccdc6b-201 protein_coding Danio_rerio 0 861
ENSDART00000063613 ccdc6a-001 protein_coding Danio_rerio 0 739
ENST00000263102 CCDC6-001 protein_coding Homo_sapiens 0 1770
ENST00000491922 CCDC6-002 retained_intron Homo_sapiens 0 678

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