C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SUZ RNA binding domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148204 Szrd1-004 ENSMUSG00000040842 10090 - 4:141113001-141139727 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryPlacentaENSMUST00000148204
Transcript ID Muscle Ovary Placenta
ENSMUST00000148204 5.259±0.65 3.470±0.56 3.478±1.88

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000401088 SZRD1-001 protein_coding Homo_sapiens 0 1544
ENST00000401089 SZRD1-005 protein_coding Homo_sapiens 0 1408
ENST00000466212 SPATA21-003 processed_transcript Homo_sapiens 0 220
ENST00000471507 SZRD1-007 protein_coding Homo_sapiens 0 1022
ENST00000472351 SZRD1-004 processed_transcript Homo_sapiens 0 933
ENST00000472461 SZRD1-003 processed_transcript Homo_sapiens 0 784
ENST00000475078 SZRD1-010 processed_transcript Homo_sapiens 0 224
ENST00000475554 SZRD1-008 processed_transcript Homo_sapiens 0 645
ENST00000476423 SZRD1-011 nonsense_mediated_decay Homo_sapiens 0 339
ENST00000486763 SZRD1-009 processed_transcript Homo_sapiens 0 627
ENST00000492354 SZRD1-006 protein_coding Homo_sapiens 0 1406
ENST00000541551 RP11-611O2.2-001 processed_pseudogene Homo_sapiens 0 363

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