C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 5 (sodium/glucose cotransporter), member 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148584 Slc5a10-002 ENSMUSG00000042371 10090 - 11:61672792-61719997 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENSMUST00000148584
Transcript ID Kidney
ENSMUST00000148584 125.250±22.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000180 CIL_000180_0003 CGP 11:61672781-61720826

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005886 IEA plasma membrane
GO:0006814 IEA sodium ion transport
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317977 SLC5A10-004 protein_coding Homo_sapiens 0 505
ENST00000330498 SLC5A2-001 protein_coding Homo_sapiens 0 244
ENST00000345041 FAM83G-201 protein_coding Homo_sapiens 0 193
ENST00000388995 FAM83G-002 protein_coding Homo_sapiens 0 255
ENST00000395643 SLC5A10-003 protein_coding Homo_sapiens 0 1109
ENST00000395645 SLC5A10-002 protein_coding Homo_sapiens 0 1755
ENST00000395647 SLC5A10-001 protein_coding Homo_sapiens 0 1055
ENST00000417251 SLC5A10-201 protein_coding Homo_sapiens 0 1055
ENST00000568188 SLC5A2-003 retained_intron Homo_sapiens 3e-26 124
ENST00000584658 SLC5A10-005 retained_intron Homo_sapiens 9.80909e-45 185

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