C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apoptosis-inducing factor, mitochondrion-associated 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149234 Aifm3-003 ENSMUSG00000022763 10090 + 16:17489847-17505406 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000149234
Transcript ID Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000149234 0.075±0.04 0.106±0.01 0.012±0.00 0.461±0.00 0.083±0.00 0.156±0.02 0.018±0.00 0.313±0.11 1.192±0.96 0.263±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002X4 CIL_0002X4_0002 CGP 16:17451987-17507485
CIL_0002X3 CIL_0002X3_0002 CGP 16:17489611-17526333

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000399163 AIFM3-003 protein_coding Homo_sapiens 0 1796
ENST00000399167 AIFM3-002 protein_coding Homo_sapiens 0 1796
ENST00000405089 AIFM3-001 protein_coding Homo_sapiens 0 1740
ENST00000417515 AIFM3-007 nonsense_mediated_decay Homo_sapiens 0 435
ENST00000426113 AIFM3-015 nonsense_mediated_decay Homo_sapiens 0 374
ENST00000434714 AIFM3-014 protein_coding Homo_sapiens 0 1064
ENST00000440238 AIFM3-201 protein_coding Homo_sapiens 0 1796
ENST00000441376 AIFM3-009 protein_coding Homo_sapiens 0 532
ENST00000465606 AIFM3-004 processed_transcript Homo_sapiens 0 990
ENST00000468124 AIFM3-016 processed_transcript Homo_sapiens 4.2039e-45 185
ENST00000483107 AIFM3-005 processed_transcript Homo_sapiens 0 617

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