C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149541 Wdr11-006 ENSMUSG00000042055 10090 + 7:129606569-129635736 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonLiverLungOvaryPlacentaENSMUST00000149541
Transcript ID Adipose Bladder Breast Colon Liver Lung Ovary Placenta
ENSMUST00000149541 2.330±0.00 0.981±0.03 0.885±0.00 1.548±0.00 0.688±0.02 1.672±0.00 2.261±0.00 1.017±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WK CIL_0002WK_0002 CGP 7:129257094-129635738
CIL_0008MH CIL_0008MH_0002 VISTA 7:129443441-130044988
CIL_0002WI CIL_0002WI_0002 CGP 7:129591863-133123350

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263461 WDR11-001 protein_coding Homo_sapiens 0 1925
ENST00000478567 WDR11-003 processed_transcript Homo_sapiens 0 549
ENST00000497136 WDR11-002 nonsense_mediated_decay Homo_sapiens 0 1622
ENST00000603658 WDR11-014 retained_intron Homo_sapiens 0 398
ENST00000604220 WDR11-018 processed_transcript Homo_sapiens 0 529
ENST00000604509 WDR11-006 processed_transcript Homo_sapiens 0 660
ENST00000604585 WDR11-016 protein_coding Homo_sapiens 0 778
ENST00000605376 WDR11-011 processed_transcript Homo_sapiens 0 562
ENST00000605543 WDR11-007 nonsense_mediated_decay Homo_sapiens 0 1543

Loading