C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | retinol dehydrogenase 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000149961  |
Rdh5-003 |
ENSMUSG00000025350 |
10090 | - |
10:128914225-128919272  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007HO | CIL_0007HO_0002 | CGP | 10:128913593-128924035 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005788 | IDA | endoplasmic reticulum lumen |
| GO:0016491 | IEA | oxidoreductase activity |
| GO:0055114 | IEA | oxidation-reduction process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000257895
|
RDH5-001 | protein_coding | Homo_sapiens | 0 | 544 |
|
ENST00000257899
|
BLOC1S1-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 322 |
|
ENST00000547072
|
RDH5-008 | protein_coding | Homo_sapiens | 0 | 544 |
|
ENST00000548082
|
RDH5-002 | protein_coding | Homo_sapiens | 0 | 544 |
|
ENST00000548486
|
RDH5-004 | retained_intron | Homo_sapiens | 0 | 470 |
|
ENST00000550412
|
BLOC1S1-001 | protein_coding | Homo_sapiens | 0 | 322 |
|
ENST00000550608
|
RDH5-003 | retained_intron | Homo_sapiens | 0 | 470 |
|
ENST00000551946
|
BLOC1S1-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 322 |
|
ENST00000553187
|
RDH5-009 | retained_intron | Homo_sapiens | 0 | 470 |
