C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007HO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000008306-ENSDARG00000014171 CGP 7955 22:10223023-10238094
GeneTranscriptPositionBiotype
ENSDARG00000008306 (rdh5)
retinol dehydrogenase 5 (11-cis/9-cis) 		ENSDART00000002348 (rdh5-201) 10223023-10232030 protein_coding
ENSDART00000128590 (rdh5-001) 10223181-10228073 protein_coding
ENSDARG00000014171 (bloc1s1)
biogenesis of lysosome-related organelles complex-1, subunit 1 		ENSDART00000013835 (bloc1s1-001) 10233879-10238094 protein_coding
CIL_0007HO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025350-ENSMUSG00000090247 CGP 10090 10:128913593-128924035
GeneTranscriptPositionBiotype
ENSMUSG00000025350 (Rdh5)
retinol dehydrogenase 5 		ENSMUST00000026406 (Rdh5-001) 128913593-128919297 protein_coding
ENSMUST00000135161 (Rdh5-007) 128918420-128922888 protein_coding
ENSMUST00000137747 (Rdh5-006) 128913817-128918052 protein_coding
ENSMUST00000139217 (Rdh5-005) 128913846-128914623 retained_intron
ENSMUST00000145616 (Rdh5-004) 128917924-128918705 protein_coding
ENSMUST00000149961 (Rdh5-003) 128914225-128919272 protein_coding
ENSMUST00000153935 (Rdh5-002) 128917301-128919297 retained_intron
ENSMUSG00000090247 (Bloc1s1)
biogenesis of lysosomal organelles complex-1, subunit 1 		ENSMUST00000026405 (Bloc1s1-001) 128919914-128923524 protein_coding
ENSMUST00000131271 (Bloc1s1-004) 128919947-128924035 protein_coding
ENSMUST00000141320 (Bloc1s1-005) 128920043-128923026 processed_transcript
ENSMUST00000143628 (Bloc1s1-002) 128922516-128923524 retained_intron
ENSMUST00000153731 (Bloc1s1-003) 128917882-128923524 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007HO_0001ENSDARG00000008306ENSDART00000002348ENSDART00000128590ENSDARG00000014171ENSDART00000013835CIL_0007HO_0002ENSMUSG00000025350ENSMUST00000026406ENSMUST00000135161ENSMUST00000137747ENSMUST00000139217ENSMUST00000145616ENSMUST00000149961ENSMUST00000153935ENSMUSG00000090247ENSMUST00000026405ENSMUST00000131271ENSMUST00000141320ENSMUST00000143628ENSMUST00000153731
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007HO_0001ENSDARG00000008306ENSDART00000002348ENSDART00000128590ENSDARG00000014171ENSDART00000013835CIL_0007HO_0002ENSMUSG00000025350ENSMUST00000026406ENSMUST00000135161ENSMUST00000153935ENSMUSG00000090247ENSMUST00000026405
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008306 ENSDART00000002348 N/A N/A N/A 0.282±0.02 N/A N/A 1.204±0.75 1.750±0.28 N/A N/A N/A N/A N/A N/A
ENSDART00000128590 N/A N/A N/A 0.211±0.00 N/A N/A 0.209±0.16 0.244±0.00 N/A N/A 0.113±0.00 N/A N/A N/A
ENSDARG00000014171 ENSDART00000013835 N/A N/A N/A 15.566±8.54 N/A N/A 15.144±2.90 6.647±0.00 1.118±0.00 N/A 8.791±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025350 ENSMUST00000026406 8.777±1.64 8.030±2.13 N/A N/A 10.469±0.65 9.717±1.25 4.905±0.13 10.558±1.48 17.597±9.10 5.499±0.86 N/A 9.962±0.93 N/A N/A
ENSMUST00000135161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.330±0.34 6.141±0.00 N/A
ENSMUST00000137747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.150±0.00 N/A N/A
ENSMUSG00000090247 ENSMUST00000026405 132.047±31.93 67.625±6.61 176.553±9.26 102.834±42.81 91.715±21.82 83.507±10.23 105.297±10.66 169.941±8.01 99.224±27.91 95.013±11.87 78.416±4.37 126.288±13.49 77.175±44.81 53.319±9.06
ENSMUST00000131271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading