C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ash2 (absent, small, or homeotic)-like (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151856 Ash2l-004 ENSMUSG00000031575 10090 - 8:25816871-25840769 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverLungOvaryENSMUST00000151856
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Lung Ovary
ENSMUST00000151856 1.634±0.66 5.459±1.49 1.472±0.00 1.377±0.38 1.145±0.26 0.814±0.00 0.706±0.14 1.242±0.12 3.037±0.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NR CIL_0008NR_0002 VISTA 8:25243011-25845762

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 ISO nucleus
GO:0006974 ISO cellular response to DNA damage stimulus
GO:0035097 ISO histone methyltransferase complex
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343823 ASH2L-001 protein_coding Homo_sapiens 0 1151
ENST00000428278 ASH2L-002 protein_coding Homo_sapiens 0 1151
ENST00000438037 ASH2LP1-001 processed_pseudogene Homo_sapiens 2e-39 167
ENST00000517496 ASH2L-005 nonsense_mediated_decay Homo_sapiens 0 1151
ENST00000518186 ASH2L-009 retained_intron Homo_sapiens 0 516
ENST00000521652 ASH2L-003 protein_coding Homo_sapiens 0 987
ENST00000521808 ASH2L-012 nonsense_mediated_decay Homo_sapiens 4.00001e-40 169
ENST00000524247 ASH2L-011 protein_coding Homo_sapiens 0 682
ENST00000524263 ASH2L-008 processed_transcript Homo_sapiens 0 396
ENST00000537279 ACACB-014 retained_intron Homo_sapiens 0.00006 55
ENST00000545394 ASH2L-201 protein_coding Homo_sapiens 0 1151

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