C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ash2 (absent, small, or homeotic)-like (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428278 ASH2L-002 ENSG00000129691 9606 + 8:38105793-38139703 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLungMuscleOvaryPlacentaTestisENST00000428278
Transcript ID Breast Colon Heart Lung Muscle Ovary Placenta Testis
ENST00000428278 3.746±0.00 5.464±0.00 1.034±0.00 2.364±0.00 5.341±0.00 6.600±0.00 7.830±2.40 17.902±1.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009C5 CIL_0009C5_0001 VISTA 8:37525567-38127835
CIL_0007QT CIL_0007QT_0001 VISTA 8:37525572-38127829

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IC DNA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 NAS transcription, DNA-templated
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006974 IDA cellular response to DNA damage stimulus
GO:0008284 IMP positive regulation of cell proliferation
GO:0030097 NAS hemopoiesis
GO:0035097 IPI histone methyltransferase complex
GO:0042800 IDA histone methyltransferase activity (H3-K4 specific)
GO:0043627 IDA response to estrogen
GO:0044212 IDA transcription regulatory region DNA binding
GO:0046872 IEA metal ion binding
GO:0048188 IDA Set1C/COMPASS complex
GO:0051568 IDA histone H3-K4 methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166078 Ash2l-201 protein_coding Mus_musculus 0 2206
ENSMUST00000110609 Ash2l-003 protein_coding Mus_musculus 0 2206
ENSMUST00000110610 Ash2l-002 protein_coding Mus_musculus 0 2206
ENSMUST00000068892 Ash2l-001 protein_coding Mus_musculus 0 2204
ENSMUST00000110608 Ash2l-006 protein_coding Mus_musculus 0 1803
ENSMUST00000139946 Ash2l-005 nonsense_mediated_decay Mus_musculus 0 1282
ENSMUST00000151856 Ash2l-004 nonsense_mediated_decay Mus_musculus 0 1151
ENSMUST00000121472 Gm13462-001 processed_pseudogene Mus_musculus 0 843
ENSMUST00000142358 Ash2l-008 retained_intron Mus_musculus 0 614
ENSMUST00000156759 Ash2l-007 processed_transcript Mus_musculus 0 342

Loading