C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphorylase kinase, gamma 2 (testis)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151908 Phkg2-003 ENSMUSG00000030815 10090 + 7:127573404-127579286 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000151908
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000151908 4.137±1.01 3.645±0.67 4.459±0.02 7.666±1.19 5.567±1.40 4.606±0.67 1.362±0.23 3.763±1.11 3.323±0.61 5.930±0.93 0.772±0.09 5.500±1.17 1.884±0.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KJ CIL_0001KJ_0002 CGP 7:127511983-127583305
CIL_0003VK CIL_0003VK_0003 CGP 7:127573340-127588595

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328273 PHKG2-004 protein_coding Homo_sapiens 0 374
ENST00000424889 PHKG2-002 protein_coding Homo_sapiens 0 374
ENST00000460061 SPOCD1-004 retained_intron Homo_sapiens 0.000000006 68
ENST00000468720 SPOCD1-006 retained_intron Homo_sapiens 0.000000006 68
ENST00000485944 SPOCD1-002 retained_intron Homo_sapiens 0.000000007 68
ENST00000563588 PHKG2-001 protein_coding Homo_sapiens 0 374
ENST00000563607 PHKG2-010 nonsense_mediated_decay Homo_sapiens 0 294
ENST00000563913 PHKG2-005 retained_intron Homo_sapiens 0 518
ENST00000564838 PHKG2-003 retained_intron Homo_sapiens 0 518
ENST00000565897 PHKG2-009 protein_coding Homo_sapiens 0 379
ENST00000565924 PHKG2-012 protein_coding Homo_sapiens 0 372
ENST00000569762 PHKG2-007 retained_intron Homo_sapiens 0 483

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