C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 35, member E1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152080 Slc35e1-001 ENSMUSG00000019731 10090 - 8:72480641-72492614 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000152080
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000152080 15.966±1.30 21.912±2.76 8.073±1.61 11.198±1.57 14.782±3.43 48.782±4.04 16.605±1.52 15.297±2.45 11.369±4.28 15.171±0.99 12.844±0.76 24.143±7.99 12.713±5.19 1.934±0.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071T CIL_00071T_0002 CGP 8:72460489-72492614
CIL_0006G5 CIL_0006G5_0002 CGP 8:72480641-72548310

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006810 IEA transport
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000409035 CTD-3222D19.2-001 nonsense_mediated_decay Homo_sapiens 2e-33 148
ENST00000409648 SLC35E1-007 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000436553 SLC35E1-004 protein_coding Homo_sapiens 0 608
ENST00000488894 SLC35E1-002 retained_intron Homo_sapiens 0 785
ENST00000595753 SLC35E1-001 protein_coding Homo_sapiens 0 1319

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