C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00071T_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000085872-ENSG00000127526 CGP 9606 19:16517889-16572382
GeneTranscriptPositionBiotype
ENSG00000085872 (CHERP)
calcium homeostasis endoplasmic reticulum protein 		ENST00000198939 (CHERP-003) 16517896-16542415 protein_coding
ENST00000544299 (CHERP-005) 16518957-16526274 processed_transcript
ENST00000546361 (CHERP-001) 16517889-16542530 protein_coding
ENST00000546538 (CHERP-004) 16531984-16542209 retained_intron
ENST00000551747 (CHERP-006) 16541205-16542400 retained_intron
ENST00000597261 (CHERP-008) 16518884-16519825 retained_intron
ENST00000600432 (CHERP-007) 16519904-16520873 retained_intron
ENSG00000127526 (SLC35E1)
solute carrier family 35, member E1 		ENST00000409648 (SLC35E1-007) 16550850-16571536 nonsense_mediated_decay
ENST00000421082 (SLC35E1-005) 16553817-16557135 protein_coding
ENST00000436553 (SLC35E1-004) 16553371-16572304 protein_coding
ENST00000469055 (SLC35E1-006) 16553849-16555601 retained_intron
ENST00000470077 (SLC35E1-003) 16555349-16566591 processed_transcript
ENST00000488894 (SLC35E1-002) 16565228-16572209 retained_intron
ENST00000593812 (SLC35E1-009) 16549831-16552333 processed_transcript
ENST00000595753 (SLC35E1-001) 16549831-16572382 protein_coding
ENST00000596387 (SLC35E1-011) 16551759-16552328 processed_transcript
ENST00000600356 (SLC35E1-010) 16553389-16564255 processed_transcript
ENST00000611092 (SLC35E1-201) 16551773-16555471 protein_coding
ENSG00000240106 (RN7SL146P)
RNA, 7SL, cytoplasmic 146, pseudogene 		ENST00000472338 (RN7SL146P-201) 16539688-16539984 misc_RNA
ENSG00000269399 (CTD-3222D19.12)
 ENST00000595909 (CTD-3222D19.12-001) 16542746-16544814 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_00071T_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000052488-ENSMUSG00000019731 CGP 10090 8:72460489-72492614
GeneTranscriptPositionBiotype
ENSMUSG00000019731 (Slc35e1)
solute carrier family 35, member E1 		ENSMUST00000141352 (Slc35e1-002) 72484574-72492217 protein_coding
ENSMUST00000152080 (Slc35e1-001) 72480641-72492614 protein_coding
ENSMUSG00000052488 (Cherp)
calcium homeostasis endoplasmic reticulum protein 		ENSMUST00000079510 (Cherp-201) 72460489-72475233 protein_coding
ENSMUSG00000052794 (1700030K09Rik)
RIKEN cDNA 1700030K09 gene 		ENSMUST00000064853 (1700030K09Rik-001) 72443880-72461001 protein_coding
ENSMUST00000121902 (1700030K09Rik-002) 72443932-72460641 protein_coding
ENSMUST00000139130 (1700030K09Rik-003) 72457890-72458651 retained_intron
ENSMUSG00000099079 (Mir7068)
microRNA 7068 		ENSMUST00000183439 (Mir7068-201) 72470016-72470089 miRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071T_0001ENSG00000085872ENST00000198939ENST00000544299ENST00000546361ENST00000546538ENST00000551747ENST00000597261ENST00000600432ENSG00000127526ENST00000409648ENST00000421082ENST00000436553ENST00000469055ENST00000470077ENST00000488894ENST00000593812ENST00000595753ENST00000596387ENST00000600356ENST00000611092ENSG00000240106ENST00000472338ENSG00000269399ENST00000595909CIL_00071T_0002ENSMUSG00000019731ENSMUST00000141352ENSMUST00000152080ENSMUSG00000052488ENSMUST00000079510ENSMUSG00000052794ENSMUST00000064853ENSMUST00000121902ENSMUST00000139130ENSMUSG00000099079ENSMUST00000183439
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00071T_0001ENSG00000085872ENST00000198939ENST00000546361ENSG00000127526ENST00000409648ENST00000436553ENST00000595753ENST00000611092ENSG00000240106ENST00000472338ENSG00000269399ENST00000595909CIL_00071T_0002ENSMUSG00000019731ENSMUST00000141352ENSMUST00000152080ENSMUSG00000052488ENSMUST00000079510ENSMUSG00000052794ENSMUST00000064853ENSMUST00000121902ENSMUSG00000099079ENSMUST00000183439
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000085872 ENST00000198939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.205±0.00 19.982±0.00 9.469±0.00 N/A
ENST00000544299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546361 N/A N/A 1.613±0.00 16.853±0.00 17.457±0.00 21.214±0.00 10.355±0.00 N/A N/A 2.028±0.00 N/A 42.180±16.04 12.049±1.80 30.195±0.00
ENST00000546538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000127526 ENST00000409648 15.130±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436553 N/A N/A 5.879±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595753 10.539±0.00 19.944±0.00 N/A 6.271±3.32 8.739±4.99 9.753±5.52 3.883±1.60 10.570±6.56 5.997±3.25 13.622±11.35 14.196±0.00 17.150±9.02 10.135±1.56 11.216±0.00
ENST00000596387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611092 N/A N/A N/A N/A N/A N/A N/A N/A 4.629±0.00 N/A N/A N/A N/A N/A
ENSG00000240106 ENST00000472338 N/A 0.397±0.00 N/A 0.093±0.00 N/A 0.775±0.07 0.078±0.00 0.085±0.00 0.226±0.00 N/A N/A 0.170±0.00 N/A 0.165±0.00
ENSG00000269399 ENST00000595909 0.211±0.00 0.429±0.00 0.112±0.00 0.288±0.16 0.141±0.08 N/A 0.120±0.09 0.482±0.04 0.109±0.00 0.220±0.16 0.222±0.00 0.484±0.41 0.080±0.02 0.559±0.23
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019731 ENSMUST00000141352 10.185±0.00 11.883±0.00 N/A N/A 14.217±1.36 N/A N/A N/A 9.781±0.52 15.338±3.20 N/A N/A N/A 1.977±0.12
ENSMUST00000152080 15.966±1.30 21.912±2.76 8.073±1.61 11.198±1.57 14.782±3.43 48.782±4.04 16.605±1.52 15.297±2.45 11.369±4.28 15.171±0.99 12.844±0.76 24.143±7.99 12.713±5.19 1.934±0.68
ENSMUSG00000052488 ENSMUST00000079510 12.939±2.76 18.107±2.17 11.953±1.23 18.510±10.30 13.469±6.46 11.448±1.72 6.650±2.16 9.551±1.30 11.424±7.25 11.532±1.70 5.129±1.26 15.714±4.73 18.520±7.49 17.313±4.91
ENSMUSG00000052794 ENSMUST00000064853 5.021±0.03 N/A 3.666±0.33 5.546±0.00 1.473±0.00 N/A 0.922±0.00 N/A 1.521±0.00 4.432±0.00 0.905±0.12 10.799±0.00 N/A 8.868±1.83
ENSMUST00000121902 3.814±0.00 N/A N/A N/A 3.168±0.80 N/A 0.952±0.00 N/A N/A N/A 1.223±0.01 5.241±1.83 N/A N/A
ENSMUST00000139130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000099079 ENSMUST00000183439 N/A N/A N/A N/A N/A N/A 45625.500±0.00 43701.500±0.00 N/A N/A N/A 51878.602±0.00 N/A 35606.699±0.00

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