C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: multiple EGF-like-domains 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152159 Megf6-002 ENSMUSG00000057751 10090 + 4:154237525-154271739 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyMusclePlacentaENSMUST00000152159
Transcript ID Brain Breast Kidney Muscle Placenta
ENSMUST00000152159 0.702±0.00 0.425±0.00 0.054±0.00 0.060±0.03 1.940±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099V CIL_00099V_0002 VISTA 4:154093365-154697126
CIL_0007TB CIL_0007TB_0002 VISTA 4:154156294-154757167

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294599 MEGF6-001 protein_coding Homo_sapiens 0 3066
ENST00000356575 MEGF6-007 protein_coding Homo_sapiens 0 207
ENST00000485002 MEGF6-002 nonsense_mediated_decay Homo_sapiens 1e-18 100

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