C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 19B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152565 Rnf19b-004 ENSMUSG00000028793 10090 + 4:129058409-129080549 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000152565
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000152565 6.356±1.48 4.976±1.08 18.367±0.00 10.911±4.40 12.491±2.89 2.938±0.51 3.505±1.74 5.636±1.31 10.118±2.43 1.838±0.28 29.831±9.23 15.923±1.38 85.330±22.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097K CIL_00097K_0002 VISTA 4:128504346-129105789

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding
GO:0042267 IMP natural killer cell mediated cytotoxicity
GO:0044194 IDA cytolytic granule
GO:0072643 IMP interferon-gamma secretion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000235150 RNF19B-004 protein_coding Homo_sapiens 0 1897
ENST00000356990 RNF19B-002 protein_coding Homo_sapiens 0 1897
ENST00000373456 RNF19B-001 protein_coding Homo_sapiens 0 1884

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