C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sulfatase modifying factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153063 Sumf2-003 ENSMUSG00000025538 10090 + 5:129852511-129862798 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryTestisENSMUST00000153063
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary Testis
ENSMUST00000153063 5.677±1.84 6.561±1.18 6.033±0.13 4.337±1.41 3.900±0.71 2.030±0.69 2.802±0.33 8.203±1.16 1.391±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MA CIL_0006MA_0002 CGP 5:129787439-129864050
CIL_00072K CIL_00072K_0003 CGP 5:129846990-129898549

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000275607 SUMF2-201 protein_coding Homo_sapiens 0 673
ENST00000342190 SUMF2-015 protein_coding Homo_sapiens 0 444
ENST00000413756 SUMF2-013 protein_coding Homo_sapiens 0 592
ENST00000413952 SUMF2-003 protein_coding Homo_sapiens 0 579
ENST00000434526 SUMF2-001 protein_coding Homo_sapiens 0 676
ENST00000447501 SUMF2-008 nonsense_mediated_decay Homo_sapiens 2e-40 171
ENST00000451338 SUMF2-012 protein_coding Homo_sapiens 0 595
ENST00000452216 SUMF2-005 nonsense_mediated_decay Homo_sapiens 0 673
ENST00000529457 SUMF2-017 retained_intron Homo_sapiens 0 272

Loading