C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hemoglobin, beta adult s chain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153218 Hbb-bs-002 ENSMUSG00000052305 10090 - 7:103827452-103828096 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PR CIL_0007PR_0002 VISTA 7:103558636-104159881
CIL_0003R8 CIL_0003R8_0007 CGP 7:103812524-103828096
CIL_0003R8 CIL_0003R8_0006 CGP 7:103826534-103840427

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005344 IEA oxygen transporter activity
GO:0005506 IEA iron ion binding
GO:0005833 IEA hemoglobin complex
GO:0015671 IEA oxygen transport
GO:0019825 IEA oxygen binding
GO:0020037 IEA heme binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000292896 HBE1-201 protein_coding Homo_sapiens 0 222
ENST00000330597 HBG1-001 protein_coding Homo_sapiens 0 231
ENST00000335295 HBB-001 protein_coding Homo_sapiens 0 320
ENST00000336906 HBG2-201 protein_coding Homo_sapiens 0 237
ENST00000380237 HBE1-001 protein_coding Homo_sapiens 0 222
ENST00000380252 HBG2-004 protein_coding Homo_sapiens 0 209
ENST00000380259 HBG2-001 protein_coding Homo_sapiens 0 237
ENST00000380315 HBB-004 protein_coding Homo_sapiens 0 259
ENST00000444587 HBG2-003 processed_transcript Homo_sapiens 0 211
ENST00000485743 HBB-002 retained_intron Homo_sapiens 0 320
ENST00000620888 HBG2-202 protein_coding Homo_sapiens 0 237
ENST00000623781 AC104389.2-201 protein_coding Homo_sapiens 0 217
ENST00000624109 AC104389.1-201 protein_coding Homo_sapiens 0 222

Loading