C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lethal, Chr 7, Rinchik 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153470 l7Rn6-001 ENSMUSG00000062797 10090 - 7:89917529-89941185 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000153470
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000153470 2.574±0.84 2.991±0.84 1.442±0.06 3.782±2.53 3.746±1.05 3.437±0.96 2.550±0.62 3.959±0.59 3.364±1.46 2.952±1.16 3.424±0.85 2.639±1.36 0.864±0.45 1.142±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00073O CIL_00073O_0002 CGP 7:89917529-89980983

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 ISS intracellular
GO:0005634 ISS nucleus
GO:0005737 IDA cytoplasm
GO:0005829 ISS cytosol
GO:0006606 ISS protein import into nucleus
GO:0007030 IMP Golgi organization
GO:0008565 ISS protein transporter activity
GO:0015031 ISS protein transport
GO:0030054 IEA cell junction
GO:0030324 IMP lung development
GO:0030544 ISS Hsp70 protein binding
GO:0034605 ISS cellular response to heat
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278483 C11orf73-001 protein_coding Homo_sapiens 0 917
ENST00000445047 RP11-654E17.2-001 processed_pseudogene Homo_sapiens 0 510
ENST00000528004 C11orf73-004 nonsense_mediated_decay Homo_sapiens 0 457
ENST00000529405 C11orf73-008 retained_intron Homo_sapiens 0 303
ENST00000530208 C11orf73-003 processed_transcript Homo_sapiens 0 732
ENST00000531485 C11orf73-006 processed_transcript Homo_sapiens 0 468
ENST00000532270 C11orf73-007 processed_transcript Homo_sapiens 0 525
ENST00000533986 C11orf73-002 protein_coding Homo_sapiens 0 806
ENST00000590455 AC007229.3-001 processed_pseudogene Homo_sapiens 1e-33 147
ENST00000618164 C11orf73-201 protein_coding Homo_sapiens 0 688

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